Genetic variations of Adiantum incisum Forssk. revealed by ISSR markers in the Western Ghats of Tamil Nadu, India

  • Abiya Chelliah D Department of Botany, St. John’s College, Palayamkottai - 627 002, Tamil Nadu
  • John De Britto Department of Botany, St. Xavier’s College, Palayamkottai - 627 002, Tamil Nadu
  • Selvin Samuel A Department of Botany, St. John’s College, Palayamkottai - 627 002, Tamil Nadu
Keywords: ISSR analysis, Adiantum incisum Forssk, genetic variation, southern Western Ghats

Abstract

Inter Simple Sequence Repeats (ISSR) markers were used to measure the levels of genetic variation and patterns of the population structure within and among the five populations of Adiantum incisum, a terrestrial fern in India. For this purpose, a detailed study was conducted in three replicates at 2011-14 season in the collection points of Western Ghats, South India. Five wild A. incisum accessions (maiden hair) were evaluated for genotyping experiment. Results showed a significant variation among genotypes and were classified based on this variation in four groups by genetic cluster analysis. In the experiment, five ISSR primers amplified 63 polymorphic bands. The genetic identity data among genotypes were calculated and varied from 0.4603 to 0.7460. The percentage of polymorphism showed superior genotype that could be used for the conservation of species. ISSR proved to be a helpful marker for genotype identification prediction within a closed group of inter specific population in the study area.

References

Bainard JD, Henry TA, Bainard LD and Newmaster SG. 2011. DNA content variation in monilophytes and lycophytes: large genomes that are not endopolyploidy. Chromosom Res. 19:763-775.

Barker MS. 2013: Karyotype and genome evolution in pteridophytes. In Plant genome Divers Vol 2, Phys Struct Behav Evol plant genomes. Edited by Leitch IJ, Greilhuber J, Dolezel J, Wendel JF. Wien: Springer: 245-253.

Barrington DS, Paris CA and Ranker TA. 1986. Systematic inferences from spore and stomate size in the ferns. Am Fern J. 76:149-159.

Chen YY, Han QX, Cheng Y, Li ZZ and Li W. 2010. Genetic variation and clonal diversity of the endangered aquatic fern Ceratopteris pteridoides as revealed by AFLP analysis. Biochem Syst Ecol. 38:1129-1136.

Dellaporta SL, Wood J and Hicks JB. 1983. A plant DNA minipreparation version II. Plant Molecular Biology Reporter. 1: 19-21.

Garland TJ, Harvey PH and Ives AR. 1992. Procedures for the analysis of comparative data using phylogenetically independent contrasts. Syst Biol. 41:18-32.

Gupta PK and Varshney RK. 2000. The development and use of microsatellite markers for genetics and plant breeding with emphasis on bread wheat. Euphytica. 113:163–185.

Kjolner S, Såstad SM and Brochmann C. 2006. Clonality and recombination in the arctic plant Saxifraga cernua. Bot. J. Linn. Soc. 152: 209–217.

Manickam VS. 1995. Rare and endangered ferns of Western Ghats of South India. FernGaz. 15(1): 1-10.

Mes THM. 1998 Character compatibility of molecular markers to distinguish asexual and sexual reproduction. Mol. Ecol. 7: 1719–1727.

MoEF. 2014. India’s Fifth National Report to the Convention on Biological Diversity, Ministry Of Environment and Forests, Government of India.

Moran RC. 1982. The Asplenium trichomanes complex in the United States and adjacent Canada. Am. Fern J. 72:5-11.

Ranker TA and Geiger JMO. 2008. Population genetics. In: Ranker TA, Haufler CH, editors. pp. 107–133. Cambridge: Cambridge University Press.

Ranker TA. 1992 Genetic diversity, mating systems, and interpopulation gene flow in neotropical Hemionitis palmata L. (Adiantaceae). Heredity. 69: 175–183.

Rumsey FJ, Vogel JC, Russell SJ, Barrett JA and Gibby M. 1999. Population structure and conservation biology of the endangered fern Trichomanes speciosum Willd. (Hymenophyllaceae) at its northern distributional limit. Biol. J. Linn. Soc. 66: 333–344.

Sahaya Pravin, A. 2005. Studies on genetic variability in some polymorphic species of ferns of Western Ghats, India through isozymic analysis. Ph.D thesis, Manonmaniam Sundaranar University, Tirunelveli, Tamil Nadu, India.

Soltis DE and Soltis PS. 1987. Polyploidy and breeding systems in homosporous Pteridophyta: a reevaluation. Amer. Natur. 130: 219–232.

Van der Hulst RGM, Mes THM, Den Nijs JCM and Bachmann K. 2000. Amplified fragment length polymorphism (AFLP) markers reveal that population structure of triploid dandelions (Taraxacum officinale) exhibits both clonality and recombination. Mol. Ecol. 9: 1–8.

Wagner W and Wagner F. 1980. Polyploidy in pteridophytes. In Polyploidy, Biol Relev. Volume 13 edition. Edited by Lewis WH. New York: Plenum Press; 199-214.

Williams GK, Anne R Kubelik, Kenneth J Livak, Antoni Rafaiski J and Scott V Tingey. 1990. DNA polymorphism amplified by arbitrary primers are useful genetic markers. Nucleic Acid Res.18: 6531-6535
Published
2014-12-31
How to Cite
D, A. C., Britto, J. D., & A, S. S. (2014). Genetic variations of Adiantum incisum Forssk. revealed by ISSR markers in the Western Ghats of Tamil Nadu, India. Journal of Research in Biology, 4(8), 1604 -. Retrieved from https://ojs.jresearchbiology.com/ojs1/index.php/jrb/article/view/520